Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930344.1_cds_XP_016477392.1_69129
CDS Infomation

[gene=LOC107798877] [db_xref=GeneID:107798877] [protein=transmembrane protein 87A-like] [protein_id=XP_016477392.1] [location=complement(join(17766..17928,18683..18819,22290..22385,22495..23431,24849..25084))] [gbkey=CDS]
Sequence

ATGGGCACTACTATTTCAGTTCAATGCTTACTCACTGTACTAGTACAGCTACTATTACTA
TCAGTCTTCAGATCAGTAGAATCCTCAATTCACATCTACGACAGAGATCCGTTTAGAGAA
GTCGGAAATGCTTACCTTGTTTCCGGCGGCAGTGAAGGCGTCGCCGCCTCTCGCTTCATT
CCTCCGCCGCGTCGCTCATTTCGATCCTCTGCCCACGACGGACTGTCTTATATCAGGTTT
GATAATATCACATTTTGGAGGAGCAAAGCAGCTGCAAACCGGAATCCAACTATGGCATAT
AATAGTGGGTTAGTTCAGATCATAATATTTGGGGCTGCAGACCGTGACAATATTGGTGGT
TCACCATATGGTGGACAAAGGTCCATTTGTTGCACCGCTGATCTTGCTAAACTTGAAGGT
TGCAAACAAGGGGAAGTCATTAGAACACCTTCAGCAACAGATGCTAATTGGCCGATGGTG
TTGAATGTTAACTTTAGAGGAAGGCAGTTATCAGCCCAATTGAAGAAGAAGGAGGTTTAC
ATAAAAAAGACTGGGATGTATAACCTCTTCTTCATCTCATGTGATCCTAAGCTTAAGGGA
ATGAAGGTGTCTGGAAGGACAGTGTGGAAAAATCCCGAGGGATATTTGCCTGGTCGAATG
TCACCCCTAATGAAGTTTTATGCTATAATGACCGTAACATATATACTTCTCGCTGGAATC
TGGTGTCTTCAGTATGTCAGATACCGGCAGGACGTTCTGCCGCTCCAATACTGCATCACT
GGGGTTATTGCCCTTGGGTTATTGGAAATGATATTTTGGTACTTTGATTATGCTTATTTC
AACAATACTGGTACAAGGCCTGTGGGACTCACGACTTGGGTTGTTATAATTGGAGCTATA
AGGAGAACTTTTTCACGCCTTCTTATTCTTTCTATCTCAATGGGATATGGTGTTGTTCGT
CCTACCCTTGGTGGTCTCACCACAAAGGTGCTCCTTCTTGGAATAACTTATTTTGTGGCA
TCTATACTGCTAAACATTACCGAATACGTTGGTACAATAAATGACATTGCAGGGCGAGCA
AAAGTCCTGTTGGTTCTTCCTGATGCATTGTTAGATGCATTTTTGATCTTATGGATTTTC
ACTTCTCTTTCCAAGACACTGGAGCAGCTTCAGGCAAAGAGGAGTTCTGTGAAGTTGGAT
ATTTACAGACAATTTTCAAATGCATTAGCAATCACTGTCATTGCTTCAGTTGCATGGATA
GGATACGAGGTTTACTTCAAAGCAACAGATCCCTTCAATGAGAGGTGGCAGGGAGGTTGG
ATCATCACTGCTTTCTGGGATATTCTTGCATTTGGACTGCTGTGTGTCATCTGCTACCTA
TGGGCACCATCTCAGAGCTCACAACGTTATGCCTACTCTGATGTGAGGGGTGAAGAGGAC
GACGAAGAAACTGAATCCTTATGCAAAGAAACTCCAAAAGGTGACATCAGTCTTATCAAA
ATGGATAGGAAGGAAGGTAGCGACAGTTCAGATGTAGAAGATGATATTCAAGAGGGTAAA
AGGGAATGA

Peptide Sequence

PEP ID

XP_016477392.1
PEP Infomation

PREDICTED: transmembrane protein 87A-like [Nicotiana tabacum]
Sequence

MGTTISVQCLLTVLVQLLLLSVFRSVESSIHIYDRDPFREVGNAYLVSGGSEGVAASRFI
PPPRRSFRSSAHDGLSYIRFDNITFWRSKAAANRNPTMAYNSGLVQIIIFGAADRDNIGG
SPYGGQRSICCTADLAKLEGCKQGEVIRTPSATDANWPMVLNVNFRGRQLSAQLKKKEVY
IKKTGMYNLFFISCDPKLKGMKVSGRTVWKNPEGYLPGRMSPLMKFYAIMTVTYILLAGI
WCLQYVRYRQDVLPLQYCITGVIALGLLEMIFWYFDYAYFNNTGTRPVGLTTWVVIIGAI
RRTFSRLLILSISMGYGVVRPTLGGLTTKVLLLGITYFVASILLNITEYVGTINDIAGRA
KVLLVLPDALLDAFLILWIFTSLSKTLEQLQAKRSSVKLDIYRQFSNALAITVIASVAWI
GYEVYFKATDPFNERWQGGWIITAFWDILAFGLLCVICYLWAPSQSSQRYAYSDVRGEED
DEETESLCKETPKGDISLIKMDRKEGSDSSDVEDDIQEGKRE

Transcript Sequence

Gene sequence data has not been registered.